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gcamp6s reporter gene sequence  (Addgene inc)


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    Addgene inc gcamp6s reporter gene sequence
    Gcamp6s Reporter Gene Sequence, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/gcamp6s+reporter+plasmid/spa-GCaMP6s+(Plasmid+%2367556)/pm36484145-82-1-13
    Average 93 stars, based on 4 article reviews
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    Related Articles

    Plasmid Preparation:

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo
    Article Snippet: .. The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942). ..

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo .
    Article Snippet: .. The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942). ..

    Bioprocessing:

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo
    Article Snippet: .. The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942). ..

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo .
    Article Snippet: .. The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942). ..



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    Image Search Results


    List of custom AAV vectors used for anatomical and functional characterization of IO by “single-AAV” and “double-AAV” approaches.

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: List of custom AAV vectors used for anatomical and functional characterization of IO by “single-AAV” and “double-AAV” approaches.

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: Functional Assay

    Comparison of tissue-fixed and live-imaging GCaMP6s fluorescence intensities in-vitro . (A1–A5) Example confocal images (5x) demonstrating wide-area GCaMP6s fluorescence obtained with 5 different constructs (as indicated above each) after 2 weeks of expression. Images are acquired from 300 μm brainstem slices, immersion-fixed after live in-vitro imaging experiments. (B) Comparison of the constructs' baseline (F 0 ) whole-field live fluorescence measurements for individual neurons (B1) and confocal imaging (B2) before (B1) and after (B2) immersion-fixing. (B3) shows the high correlation between the live imaging and confocal imaging results. Colored dots are average values for each construct, where 10 to 20 neurons per slice for the live, and fixed condition in the same slices. (n = 3 slices per animal, min. 2 animals per construct). (C) Distribution of raw live-imaging fluorescence intensities varies between constructs (C1) , but the relative ranges are nearly identical when normalized to maximal intensity in each slice (C2) . Dashed line in (C2) indicates relative intensity of 0.3. For (B,C) , data from different constructs are labeled with colors as in (A) .

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: Comparison of tissue-fixed and live-imaging GCaMP6s fluorescence intensities in-vitro . (A1–A5) Example confocal images (5x) demonstrating wide-area GCaMP6s fluorescence obtained with 5 different constructs (as indicated above each) after 2 weeks of expression. Images are acquired from 300 μm brainstem slices, immersion-fixed after live in-vitro imaging experiments. (B) Comparison of the constructs' baseline (F 0 ) whole-field live fluorescence measurements for individual neurons (B1) and confocal imaging (B2) before (B1) and after (B2) immersion-fixing. (B3) shows the high correlation between the live imaging and confocal imaging results. Colored dots are average values for each construct, where 10 to 20 neurons per slice for the live, and fixed condition in the same slices. (n = 3 slices per animal, min. 2 animals per construct). (C) Distribution of raw live-imaging fluorescence intensities varies between constructs (C1) , but the relative ranges are nearly identical when normalized to maximal intensity in each slice (C2) . Dashed line in (C2) indicates relative intensity of 0.3. For (B,C) , data from different constructs are labeled with colors as in (A) .

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: Comparison, Imaging, Fluorescence, In Vitro, Construct, Expressing, Labeling

    Effects of GCaMP6s expression level on the action-potential-related fluorescence signal. (A,B) Comparison between calcium events in units of power (fW) obtained with the 5 different constructs as indicated by the color labels, 2 weeks after injection. The schematic examples on top of the figure (in a dashed-line box; note that the image brightness of the standard deviation time series projection is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging) describe extraction of the calcium fluorescence event parameters in acute IO slices. (A1) Averaged event waveforms aligned on initiation point (black dot). The shaded areas denote ± SEM. (A2) Average calcium event peaks; (A3) their cumulative distributions, with arrow and horizontal line segment highlighting the convergence of maximal values of eCa peaks between high-expressing constructs; (A4) relation between average event peaks and baseline fluorescence in each cell. (B) Same data as in (A) but normalized to F 0 for a baseline-normalized DFF values, similarly represented in boxplot (B2) , distribution plot (B3) and construct-averages represented against their respective F 0 s (B4) . (C) Same data as in (B) but peak-amplitude-normalized to compare event kinetics. (C1) averaged event waveforms; (C2) comparison of average event rise times; (C3) cumulative distributions of event rise times; (C4) individual event rise times and baseline-normalized event amplitudes show linear relation. The colored dots in (C4) represent averages for each construct data, gray dots are individual events. Colored bars in (A2,B2,C2) denote average values. Horizontal and vertical lines in (A4,B4) denote ± SEM values in each dimension. Statistics for eCa F-peak on (A2) (1-way ANOVA, [AAV9-Htr5b(3.7)-tTA/TRE vs. AAV.PHP.eB-Htr5b(3.7)-tTA/TRE] f = 1.56, p = 0.1; [AAV9-Htr5b(3.7)-tTA/TRE vs. AAV.PHP.S-Htr5b(3.7)-tTA/TRE] f = 1.9, p = 0.17).

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: Effects of GCaMP6s expression level on the action-potential-related fluorescence signal. (A,B) Comparison between calcium events in units of power (fW) obtained with the 5 different constructs as indicated by the color labels, 2 weeks after injection. The schematic examples on top of the figure (in a dashed-line box; note that the image brightness of the standard deviation time series projection is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging) describe extraction of the calcium fluorescence event parameters in acute IO slices. (A1) Averaged event waveforms aligned on initiation point (black dot). The shaded areas denote ± SEM. (A2) Average calcium event peaks; (A3) their cumulative distributions, with arrow and horizontal line segment highlighting the convergence of maximal values of eCa peaks between high-expressing constructs; (A4) relation between average event peaks and baseline fluorescence in each cell. (B) Same data as in (A) but normalized to F 0 for a baseline-normalized DFF values, similarly represented in boxplot (B2) , distribution plot (B3) and construct-averages represented against their respective F 0 s (B4) . (C) Same data as in (B) but peak-amplitude-normalized to compare event kinetics. (C1) averaged event waveforms; (C2) comparison of average event rise times; (C3) cumulative distributions of event rise times; (C4) individual event rise times and baseline-normalized event amplitudes show linear relation. The colored dots in (C4) represent averages for each construct data, gray dots are individual events. Colored bars in (A2,B2,C2) denote average values. Horizontal and vertical lines in (A4,B4) denote ± SEM values in each dimension. Statistics for eCa F-peak on (A2) (1-way ANOVA, [AAV9-Htr5b(3.7)-tTA/TRE vs. AAV.PHP.eB-Htr5b(3.7)-tTA/TRE] f = 1.56, p = 0.1; [AAV9-Htr5b(3.7)-tTA/TRE vs. AAV.PHP.S-Htr5b(3.7)-tTA/TRE] f = 1.9, p = 0.17).

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: Expressing, Fluorescence, Comparison, Construct, Injection, Standard Deviation, Imaging, Extraction

    Calcium event waveforms do not differ between patched and intact neurons. (A) Example of a combined in vitro patch-imaging experiment. (A1) shows an infrared-contrast image overlaid with standard deviation projection of fluorescence recording time series, and 5 somata identified in the field of view are indicated with dashed lines (ROIs). Cell labeled 1 was recorded with a patch-clamp pipette. (A2) shows the GCaMP6s signals obtained from all of the 5 cells in the field of view (green traces, ROIs indicated with numbers), and the time-aligned electrical recording from cell 1 (black trace). (B) Comparison of calcium event waveforms in patched (black) cells and intact (green cells). (B1) Time-aligned action potential waveforms from all 14 patched cells, aligned at calcium-event onsets. Thick black trace is the average of all spikes. B2, averaged, onset-aligned and normalized calcium event waveforms peak with shaded areas denoting ± SEM. (B2) Comparison between rise times (left) and peak amplitudes (right) of calcium events recorded in patched and intact cells. Green and black bars in box plots represent averages; circles represent outliers. Statistics for eCa event Rise-time between patched and non-patched neurons on (B3) (1-way ANOVA, f = 0.085, p = 0.77). Statistics for eCa event peak amplitude between patched (n = 46 events on 13 neurons) and non-patched neurons on (B3) (1-way ANOVA, f = 11.09, p = 0.0.0012).

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: Calcium event waveforms do not differ between patched and intact neurons. (A) Example of a combined in vitro patch-imaging experiment. (A1) shows an infrared-contrast image overlaid with standard deviation projection of fluorescence recording time series, and 5 somata identified in the field of view are indicated with dashed lines (ROIs). Cell labeled 1 was recorded with a patch-clamp pipette. (A2) shows the GCaMP6s signals obtained from all of the 5 cells in the field of view (green traces, ROIs indicated with numbers), and the time-aligned electrical recording from cell 1 (black trace). (B) Comparison of calcium event waveforms in patched (black) cells and intact (green cells). (B1) Time-aligned action potential waveforms from all 14 patched cells, aligned at calcium-event onsets. Thick black trace is the average of all spikes. B2, averaged, onset-aligned and normalized calcium event waveforms peak with shaded areas denoting ± SEM. (B2) Comparison between rise times (left) and peak amplitudes (right) of calcium events recorded in patched and intact cells. Green and black bars in box plots represent averages; circles represent outliers. Statistics for eCa event Rise-time between patched and non-patched neurons on (B3) (1-way ANOVA, f = 0.085, p = 0.77). Statistics for eCa event peak amplitude between patched (n = 46 events on 13 neurons) and non-patched neurons on (B3) (1-way ANOVA, f = 11.09, p = 0.0.0012).

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: In Vitro, Imaging, Standard Deviation, Fluorescence, Labeling, Patch Clamp, Transferring, Comparison

    Somatic calcium events are only generated by action potentials occurring in the recorded cells regardless of oscillatory status. (A) Simultaneous current-clamp and GCaMP6s imaging shows that a spike in a neighboring IO neuron (A1) is reflected as an electrophysiological “spikelet” in the oscillating cell labeled with an asterisk. The image in (A1) is a standard deviation time series projection of fluorescence time-series recording. Note that the image brightness is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging. Only cells that spiked during the recording are visible. (A2) shows time-aligned fluorescence (top) and V m (bottom) traces, and the neighbor-spike-related spikelet in patched cell is indicated with an asterisk in the inset. (B) Another example of a simultaneous GCaMP6s and current-clamp recording from 3 IO neurons demonstrating presence of electrophysiological “spikelets” in a patched cell [labeled with “*” in (B1) ] linked with neighboring cell calcium events. There are three spikelets in the recording, indicated by thin vertical lines, and two of them are enlarged in insets. Current-injection-evoked spiking in the patched cell results in calcium spikes in the neighbor cells, indicative of gap junction coupling.

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: Somatic calcium events are only generated by action potentials occurring in the recorded cells regardless of oscillatory status. (A) Simultaneous current-clamp and GCaMP6s imaging shows that a spike in a neighboring IO neuron (A1) is reflected as an electrophysiological “spikelet” in the oscillating cell labeled with an asterisk. The image in (A1) is a standard deviation time series projection of fluorescence time-series recording. Note that the image brightness is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging. Only cells that spiked during the recording are visible. (A2) shows time-aligned fluorescence (top) and V m (bottom) traces, and the neighbor-spike-related spikelet in patched cell is indicated with an asterisk in the inset. (B) Another example of a simultaneous GCaMP6s and current-clamp recording from 3 IO neurons demonstrating presence of electrophysiological “spikelets” in a patched cell [labeled with “*” in (B1) ] linked with neighboring cell calcium events. There are three spikelets in the recording, indicated by thin vertical lines, and two of them are enlarged in insets. Current-injection-evoked spiking in the patched cell results in calcium spikes in the neighbor cells, indicative of gap junction coupling.

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: Generated, Imaging, Labeling, Standard Deviation, Fluorescence, Injection

    Electrophysiological features of IO action potentials are reflected in the GCaMP6s event waveform. (A) Principal component analysis of IO action potential waveforms. (A1) 60 voltage spike events detected and aligned on initiation point. (A2) Relative contributions of the principal components to the waveform variability. The 3 first PCAs explain 95%. (A3) Time-varying contributions of the 3 first PCAs, corresponding to the “calcium shoulder” (solid line), after-hyperpolarizarion (dashed line), and the sodium spike (dotted line). (B) Clustering IO calcium events (eCAs) based on the PCA analysis in (A) . (B1) k -means clustering (indicated by colored markers) of the IO action potentials shown in (A1) . (B2) Averaged electrophysiological waveforms from the clusters identified in (B1) . (B3) The average calcium event waveforms linked to the electrophysiological clusters in (B1,B2) . Note that no noticeable calcium transients are seen linked with cluster 1 that corresponds to “spikelet” events (see ). Also, the calcium events belonging liked to cluster 6 events lacking a full sodium spike are very small in amplitude. Spikes from cluster 6 are excluded from rest of analysis, and only the 46 spikes [corresponding to clusters 1–5] recorded in 13 healthy IO neurons are depicted in following. (C) Calcium event peak amplitudes (C1) and rise times (C2) strongly correlate with the electrophysiological spike widths (n = 31 events, clusters 2–5). Note that the eCa amplitude-to-spike width relation saturates with longest spikes, while rise time to spike width relation is more robust. (C3) Relation between calcium event rise time and peak amplitude. Note slight non-linearity with largest events. The colored points and black circles represent average values for respective clusters and individual observations respectively. Events from clusters 1 and 6 are not shown in (C1,C2) as they correspond to spikelets and unhealthy neuron spikes. (C3) consists of data from clusters 1–5. (D) Spike cluster diversity in different recordings. (D1) Number of spike cluster observations for each cell. Note that the “incomplete spikes” (cluster 6) and “short IO spikes” (cluster 2) are only seen in single cells each while spikes from other clusters are seen in multiple cells. (D2) Box-plot including data from clusters 2–5 providing suggestive translation scale between observed calcium event rise time (bottom scale) and the corresponding electrophysiological spike width (top scale). Calcium events with rise times longer than 150 ms correspond to “normal” IO spikes (IO-S). The “short IO spikes” (sIO-s) do not present a clear calcium shoulder and may be caused by unusual physiological state of the IO neuron, possibly due to major damage to dendrites caused by slice preparation.

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: Electrophysiological features of IO action potentials are reflected in the GCaMP6s event waveform. (A) Principal component analysis of IO action potential waveforms. (A1) 60 voltage spike events detected and aligned on initiation point. (A2) Relative contributions of the principal components to the waveform variability. The 3 first PCAs explain 95%. (A3) Time-varying contributions of the 3 first PCAs, corresponding to the “calcium shoulder” (solid line), after-hyperpolarizarion (dashed line), and the sodium spike (dotted line). (B) Clustering IO calcium events (eCAs) based on the PCA analysis in (A) . (B1) k -means clustering (indicated by colored markers) of the IO action potentials shown in (A1) . (B2) Averaged electrophysiological waveforms from the clusters identified in (B1) . (B3) The average calcium event waveforms linked to the electrophysiological clusters in (B1,B2) . Note that no noticeable calcium transients are seen linked with cluster 1 that corresponds to “spikelet” events (see ). Also, the calcium events belonging liked to cluster 6 events lacking a full sodium spike are very small in amplitude. Spikes from cluster 6 are excluded from rest of analysis, and only the 46 spikes [corresponding to clusters 1–5] recorded in 13 healthy IO neurons are depicted in following. (C) Calcium event peak amplitudes (C1) and rise times (C2) strongly correlate with the electrophysiological spike widths (n = 31 events, clusters 2–5). Note that the eCa amplitude-to-spike width relation saturates with longest spikes, while rise time to spike width relation is more robust. (C3) Relation between calcium event rise time and peak amplitude. Note slight non-linearity with largest events. The colored points and black circles represent average values for respective clusters and individual observations respectively. Events from clusters 1 and 6 are not shown in (C1,C2) as they correspond to spikelets and unhealthy neuron spikes. (C3) consists of data from clusters 1–5. (D) Spike cluster diversity in different recordings. (D1) Number of spike cluster observations for each cell. Note that the “incomplete spikes” (cluster 6) and “short IO spikes” (cluster 2) are only seen in single cells each while spikes from other clusters are seen in multiple cells. (D2) Box-plot including data from clusters 2–5 providing suggestive translation scale between observed calcium event rise time (bottom scale) and the corresponding electrophysiological spike width (top scale). Calcium events with rise times longer than 150 ms correspond to “normal” IO spikes (IO-S). The “short IO spikes” (sIO-s) do not present a clear calcium shoulder and may be caused by unusual physiological state of the IO neuron, possibly due to major damage to dendrites caused by slice preparation.

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: Slice Preparation

    In-vitro calcium imaging of IO subthreshold oscillations. (A,B) Example in vitro calcium imaging recordings from dense (A) and sparse (B) transfection, using the constructs as indicated above the panels. Identified IO neuron somata are indicated with dotted ROIs in time-series projection images in (A1,B1) ; note that the image brightness is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging. The GCaMP6s traces corresponding to labeled ROIs are shown in (A2,B2) . In the example shown in (B) , only one cell is labeled, and 4 neighboring regions indicated by dotted squares in (B1) , are shown as ROIs representing signal from non-transfected cells. Asterisks in (A2) indicate detected calcium spikes. Note the different vertical scales in (A2,B2) , reflecting lower GCaMP6s concentration in (B) . (A3,B3) : Welch spectra for the example recordings show a sharply defined frequency peak for the oscillating cells (left). Right show the peak frequency of the example recordings (colored arrows) with respect to the entire population (gray bars) (C) The power of observed oscillations in calcium traces is stronger with higher baseline fluorescence level resulting from higher concentration of GCaMP6s. Colored lines [in C1,C3 ] and markers (C2,C4) represent data obtained with the 5 different constructs as indicated at the bottom right corner of the figure. (C1,C2) display the ranges of oscillation in terms of STO-bandwith power (C1) and oscillation peak-to-peak amplitude (C2) . Note that the oscillation amplitude increase saturates below 1% (C3) , while all of the constructs were shown to report spike amplitudes with several-fold higher . (C2,C4) display the relation between single-cell baseline fluorescence intensity (F 0 , x -axis) and oscillation power (C2) and peak-to-peak amplitude (C4) . Dotted horizontal line in (C4) represents the threshold of 0.12 % DFF for classification of the signal as “oscillating” as determined in . (D) Summary of imaging capabilities of the different constructs for reporters of IO action potentials (vertical axis) and STOs (horizontal axis). The constructs with intermediate expression levels (orange and green data points; see ) provide better resolution of spike waveforms. The constructs with highest expression (blue data) under-perform with spike amplitudes but provide high resolution of the subthreshold oscillations.

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: In-vitro calcium imaging of IO subthreshold oscillations. (A,B) Example in vitro calcium imaging recordings from dense (A) and sparse (B) transfection, using the constructs as indicated above the panels. Identified IO neuron somata are indicated with dotted ROIs in time-series projection images in (A1,B1) ; note that the image brightness is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging. The GCaMP6s traces corresponding to labeled ROIs are shown in (A2,B2) . In the example shown in (B) , only one cell is labeled, and 4 neighboring regions indicated by dotted squares in (B1) , are shown as ROIs representing signal from non-transfected cells. Asterisks in (A2) indicate detected calcium spikes. Note the different vertical scales in (A2,B2) , reflecting lower GCaMP6s concentration in (B) . (A3,B3) : Welch spectra for the example recordings show a sharply defined frequency peak for the oscillating cells (left). Right show the peak frequency of the example recordings (colored arrows) with respect to the entire population (gray bars) (C) The power of observed oscillations in calcium traces is stronger with higher baseline fluorescence level resulting from higher concentration of GCaMP6s. Colored lines [in C1,C3 ] and markers (C2,C4) represent data obtained with the 5 different constructs as indicated at the bottom right corner of the figure. (C1,C2) display the ranges of oscillation in terms of STO-bandwith power (C1) and oscillation peak-to-peak amplitude (C2) . Note that the oscillation amplitude increase saturates below 1% (C3) , while all of the constructs were shown to report spike amplitudes with several-fold higher . (C2,C4) display the relation between single-cell baseline fluorescence intensity (F 0 , x -axis) and oscillation power (C2) and peak-to-peak amplitude (C4) . Dotted horizontal line in (C4) represents the threshold of 0.12 % DFF for classification of the signal as “oscillating” as determined in . (D) Summary of imaging capabilities of the different constructs for reporters of IO action potentials (vertical axis) and STOs (horizontal axis). The constructs with intermediate expression levels (orange and green data points; see ) provide better resolution of spike waveforms. The constructs with highest expression (blue data) under-perform with spike amplitudes but provide high resolution of the subthreshold oscillations.

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: In Vitro, Imaging, Transfection, Construct, Labeling, Concentration Assay, Fluorescence, Expressing

    GCaMP6s-STOs are reporting electrophysiological STOs in vitro . (A) Example of a simultaneous patch clamp and calcium imaging recording of an IO cell in-vitro . (A1) shows the standard deviation projection image of the recorded time series, with the patched cell indicated with a dashed line. Note that the image brightness is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging. (A2) time-aligned GCaMP6s trace (top) and (V m ) trace (middle). The section of traces indicated by dotted rectangle is shown overlaid in bottom. The autocorrelation of the calcium trace (A3) as well as comparison of its Welch spectrum with that of the electrophysiological recording (A4) show stable oscillatory behavior in this cell. (B) The frequency of GCaMP6s STOs closely matches that of electrophysiological recordings. (B1) Frequency ratios of voltage ( y -axis) and fluorescence ( x -axis) signals is flat over large range of oscillation power. Dotted line indicates a threshold of 1 mV 2 RMS used to classify cells as “oscillating” or “non-oscillating.” (B2) Relation between electrophysiological STO power and GCaMP6s STO amplitude. Dotted line indicates the 1 mV 2 RMS threshold value as in (B1) . (B3) Comparison of STO power of the GCaMP6s signal obtained from cells classified as oscillating (green) or non-oscillating (black) based on the 1 mV 2 RMS threshold (Welch t-test, t = -4.99, p < 0.05).

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: GCaMP6s-STOs are reporting electrophysiological STOs in vitro . (A) Example of a simultaneous patch clamp and calcium imaging recording of an IO cell in-vitro . (A1) shows the standard deviation projection image of the recorded time series, with the patched cell indicated with a dashed line. Note that the image brightness is adjusted for viewing and should not be considered as representative of the dynamic range during live imaging. (A2) time-aligned GCaMP6s trace (top) and (V m ) trace (middle). The section of traces indicated by dotted rectangle is shown overlaid in bottom. The autocorrelation of the calcium trace (A3) as well as comparison of its Welch spectrum with that of the electrophysiological recording (A4) show stable oscillatory behavior in this cell. (B) The frequency of GCaMP6s STOs closely matches that of electrophysiological recordings. (B1) Frequency ratios of voltage ( y -axis) and fluorescence ( x -axis) signals is flat over large range of oscillation power. Dotted line indicates a threshold of 1 mV 2 RMS used to classify cells as “oscillating” or “non-oscillating.” (B2) Relation between electrophysiological STO power and GCaMP6s STO amplitude. Dotted line indicates the 1 mV 2 RMS threshold value as in (B1) . (B3) Comparison of STO power of the GCaMP6s signal obtained from cells classified as oscillating (green) or non-oscillating (black) based on the 1 mV 2 RMS threshold (Welch t-test, t = -4.99, p < 0.05).

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: In Vitro, Patch Clamp, Imaging, Standard Deviation, Comparison, Fluorescence

    Recording of climbing fiber calcium events in vivo. (A1–A3) Expression of GCaMP6s in cerebellar climbing fibers with AAV9, AAV.PHP.S, AAV.PHP.eB-Htr5b(3.7)-tTA/TRE constructs, respectively. (A1-A3) are tiled and Z-projected 40x confocal images of sagittal cerebellar sections showing expression of GCaMP6s in axons in the cerebellar cortex with samples prepared for anatomical study. Expression of GCaMP6s in CF is sparse in when the viral serotype is AAV.PHP.S, while dense and widespread with AAV.PHP.eB serotype. The inset [in (B1) ] indicates the region that was imaged in with the miniscope (see schematic on top of the figure). (B) Example recording from CFs in a living mouse. (B1) Is a sagittal slice from tissue on the same brain where in-vivo calcium imaging was done. A schematic labeled beta describes the experiment procedure. (B2) , z -projection image (standard deviation) of miniscope calcium recording time series (20 second recordings per zone) as seen from the dorsal surface of the cerebellar cortex. Anterio-posterior (AP) and medio-lateral (ML) directions are indicated with white arrows. The dashed lines indicate manually-drawn ROIs for CFs, and the respective calcium traces are shown in (B3) . Parts of two of the traces [2 and 5, indicated by dashed rectangles in (B4) ] are shown with expanded time scale at the bottom of the panel. Detected events are indicated by asterisks. (C) Comparing in vivo calcium events recorded in IO axons (CFs; blue) with the somata (green). n = 70 events in 2 animals for axon recordings, 22 events in 4 animals for somata. (C1) Average in-vivo GCaMP6s transients from CFs and IO somata, aligned at initiation point. Shaded regions represent ± SEM. (C2) Comparison of calcium event amplitudes in IO somas and axons when normalized to basal fluorescence (1-way ANOVA, f = 8.19, p < 0.001). (C3) Comparison of event rise-times between IO soma and climbing fibers (1-way ANOVA, f = 5.3, p < 0.001). (C4) Comparison of the instantaneous frequency of events (inverse of inter-event interval) in the axon vs. the soma (1-way ANOVA, f = 5.35, p < 0.023). Note the slower spike rate in somatic recordings, possibly due to tissue cooling during the ventral surgery needed for somatic recordings.

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: Recording of climbing fiber calcium events in vivo. (A1–A3) Expression of GCaMP6s in cerebellar climbing fibers with AAV9, AAV.PHP.S, AAV.PHP.eB-Htr5b(3.7)-tTA/TRE constructs, respectively. (A1-A3) are tiled and Z-projected 40x confocal images of sagittal cerebellar sections showing expression of GCaMP6s in axons in the cerebellar cortex with samples prepared for anatomical study. Expression of GCaMP6s in CF is sparse in when the viral serotype is AAV.PHP.S, while dense and widespread with AAV.PHP.eB serotype. The inset [in (B1) ] indicates the region that was imaged in with the miniscope (see schematic on top of the figure). (B) Example recording from CFs in a living mouse. (B1) Is a sagittal slice from tissue on the same brain where in-vivo calcium imaging was done. A schematic labeled beta describes the experiment procedure. (B2) , z -projection image (standard deviation) of miniscope calcium recording time series (20 second recordings per zone) as seen from the dorsal surface of the cerebellar cortex. Anterio-posterior (AP) and medio-lateral (ML) directions are indicated with white arrows. The dashed lines indicate manually-drawn ROIs for CFs, and the respective calcium traces are shown in (B3) . Parts of two of the traces [2 and 5, indicated by dashed rectangles in (B4) ] are shown with expanded time scale at the bottom of the panel. Detected events are indicated by asterisks. (C) Comparing in vivo calcium events recorded in IO axons (CFs; blue) with the somata (green). n = 70 events in 2 animals for axon recordings, 22 events in 4 animals for somata. (C1) Average in-vivo GCaMP6s transients from CFs and IO somata, aligned at initiation point. Shaded regions represent ± SEM. (C2) Comparison of calcium event amplitudes in IO somas and axons when normalized to basal fluorescence (1-way ANOVA, f = 8.19, p < 0.001). (C3) Comparison of event rise-times between IO soma and climbing fibers (1-way ANOVA, f = 5.3, p < 0.001). (C4) Comparison of the instantaneous frequency of events (inverse of inter-event interval) in the axon vs. the soma (1-way ANOVA, f = 5.35, p < 0.023). Note the slower spike rate in somatic recordings, possibly due to tissue cooling during the ventral surgery needed for somatic recordings.

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: In Vivo, Expressing, Construct, Imaging, Labeling, Standard Deviation, Comparison, Fluorescence

    In-vitro properties of  GCaMP6s  signals found in inferior olive.

    Journal: Frontiers in Cellular Neuroscience

    Article Title: Designing AAV Vectors for Monitoring the Subtle Calcium Fluctuations of Inferior Olive Network in vivo

    doi: 10.3389/fncel.2022.825056

    Figure Lengend Snippet: In-vitro properties of GCaMP6s signals found in inferior olive.

    Article Snippet: The GCaMP6s reporter plasmid was prepared from an AAV plasmid with GCaMP6s (Addgene #50942).

    Techniques: Fluorescence

    a. Expression profiles of tanycytes specific Cre-expressing rAAVs in reporter mice across the brain. Expression of AAV-Dio2-iCRE-GFP was assessed in ROSA26|STOP|tdTomato fl/fl reporter mice 3 weeks post i.c.v. injection in ARC, d3V, LV and AP. AAV-Dio2-Cre was injected i.c.v. in mice expressing Cre-dependent ZsGreen reporter from ROSA26 locus (Rosa26|STOP|ZsGreen fl/fl ) and assessed in ARC, SFO, LV and AP. Virus expression and fluorescence of the ZsGreen reporter was assessed 3 – 4 weeks post injection in 3 – 5 mice. b. AAV-Dio2-GFP representative images were acquired from IR GFP-Tan mice 6 weeks post injection. AAV-Dio2-mKate2 expression in tanycyte nuclei was verified in IR fl/fl mice 3 weeks post injection. Because AAV-Dio2-mKate2 exhibited a weak fluorescent signal, it was amplified with immunohistochemistry staining for red fluorescent protein (RFP). All viruses were expressed in the lateral and basal tanycytes of the 3 rd ventricle. n = 4/group. c. Representative images of smISH of ZsGreen mRNA expression in mediobasal hypothalamus of Rosa26|STOP | ZsGreen fl/fl -mice 3 weeks post i.c.v. injection of AAV-Dio2-Cre virus in 5 mice. Expression of Zsgreen reporter gene was assessed in the anterior and posterior hypothalamus (c1 – medial dorsal, c2 – medial ventral, c3 – posterior dorsal, c4 – posterior ventral) by co-labelling for tanycyte- ( Dio2 ) and astrocyte- ( GFAP ) specific genes. Dashed lines indicate the outline of the ARC. ARC – arcuate nucleus, d3V – dorsal third ventricle, SFO - subfornical organ, LV – lateral ventricle, AP – Area Postrema.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a. Expression profiles of tanycytes specific Cre-expressing rAAVs in reporter mice across the brain. Expression of AAV-Dio2-iCRE-GFP was assessed in ROSA26|STOP|tdTomato fl/fl reporter mice 3 weeks post i.c.v. injection in ARC, d3V, LV and AP. AAV-Dio2-Cre was injected i.c.v. in mice expressing Cre-dependent ZsGreen reporter from ROSA26 locus (Rosa26|STOP|ZsGreen fl/fl ) and assessed in ARC, SFO, LV and AP. Virus expression and fluorescence of the ZsGreen reporter was assessed 3 – 4 weeks post injection in 3 – 5 mice. b. AAV-Dio2-GFP representative images were acquired from IR GFP-Tan mice 6 weeks post injection. AAV-Dio2-mKate2 expression in tanycyte nuclei was verified in IR fl/fl mice 3 weeks post injection. Because AAV-Dio2-mKate2 exhibited a weak fluorescent signal, it was amplified with immunohistochemistry staining for red fluorescent protein (RFP). All viruses were expressed in the lateral and basal tanycytes of the 3 rd ventricle. n = 4/group. c. Representative images of smISH of ZsGreen mRNA expression in mediobasal hypothalamus of Rosa26|STOP | ZsGreen fl/fl -mice 3 weeks post i.c.v. injection of AAV-Dio2-Cre virus in 5 mice. Expression of Zsgreen reporter gene was assessed in the anterior and posterior hypothalamus (c1 – medial dorsal, c2 – medial ventral, c3 – posterior dorsal, c4 – posterior ventral) by co-labelling for tanycyte- ( Dio2 ) and astrocyte- ( GFAP ) specific genes. Dashed lines indicate the outline of the ARC. ARC – arcuate nucleus, d3V – dorsal third ventricle, SFO - subfornical organ, LV – lateral ventricle, AP – Area Postrema.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Expressing, Injection, Virus, Fluorescence, Amplification, Immunohistochemistry, Staining

    a , Knockout strategy to inactivate IR specifically in tanycytes. Animals 10–12 weeks old received i.c.v. injection of either control virus AAV-Dio2-GFP or AAV-Dio2-mKate2 (IR GFP-Tan , IR mKate2 ) or Cre-recombinase-carrying virus AAV-Dio2-iCRE-GFP or AAV-Dio2-Cre (IR ΔTan ). b , Representative images of pAKT signal in basal and lateral tanycytes of unstimulated (0 min) and 5 and 10 min post i.v. injection of 0.5 IU kg −1 insulin in NCD-fed control animals IR GFP-Tan (NCD) (top panel), tanycyte-specific IR KO animals (IR ΔTan ) (NCD) (middle panel) and HFD-fed control animals IR GFP-Tan (HFD) (lower panel). pAKT was quantified in DAPI-positive tanycyte layer. White and yellow dashed lines indicate quantified ROI in basal and lateral tanycytes, respectively. c , d , Mean intensity of pAKT signal in DAPI-positive nuclei of basal ( c ) and lateral tanycytes ( d ). c , 5 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.047, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0041; 10 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0144, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0205. d , P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0994, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0151; 10 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0031, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0309. b – d , n (0 min) = 3/IR GFP-Tan (NCD), 4/IR ΔTan (NCD), 4/IR GFP-Tan (HFD); n (5 min) = 5 mice per group; n (10 min) = 5/IR GFP-Tan (NCD), 6/IR ΔTan (NCD), 4/IR GFP-Tan (HFD). e , Knockout strategy to inactivate IR in endothelial cells. The 10–12-week-old IR fl/fl Slco1c1-CreERT2 wt/wt and IR fl/fl Slco1c1-CreERT2 tg/wt littermates received tamoxifen (10 mg d −1 , 5 d). f , Representative images of pAKT signal in lectin-positive brain cortices of unstimulated mice (0 min) and 5 min post i.v. injection of 0.5 IU kg −1 insulin in IR wt/wt and IR ΔBVEC mice. g , pAKT in lectin-positive microvessels, normalized to IR wt/wt control animals. P (5 min) = 0.0007. f , g , n (0 min) = 3/IR wt/wt , 4/IR ΔBVEC ; n (5 min) = 4/IR wt/wt , 6/IR ΔBVEC (unpaired, two-sided Student’s t -test). h , Representative images of pAKT in the ARC of unstimulated mice (0 min) and 5, 10, 20 and 30 min post i.v. injection of 0.5 IU kg −1 insulin in NCD-fed control animals IR GFP-Tan (NCD) (top panel), tanycyte-specific IR KO animals IR ΔTan (NCD) (middle panel) and HFD-fed control animals IR GFP-Tan (HFD) (lower panel). i , Quantification of pAKT-positive cells per ARC hemisphere. 5 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.104, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0341; 10 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0014, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0069; 20 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.007, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0023. h , i , n (0 min) = 3/IR GFP-Tan (NCD), 4/IR ΔTan (NCD), 4/IR GFP-Tan (HFD); n (5 min) = 5 mice per group; n (10 min, 20 min, 30 min) = 5/IR GFP-Tan (NCD), 6/IR ΔTan (NCD), 4/IR GFP-Tan (HFD). j , Representative images of pAKT in ARC of unstimulated mice (0 min) and 5 and 15 min post i.v. injection of 0.5 IU kg −1 insulin in tamoxifen-treated IR wt/wt and IR ΔBVEC mice. k , Quantification of pAKT-positive cells per hemisphere of ARC in treated IR wt/wt and IR ΔBVEC mice. j , k , n (0 min) = 4/IR wt/wt , 3/IR ΔBVEC ; n (5 min) = 3/IR wt/wt , 5/IR ΔBVEC ; n (5 min) = 3/IR wt/wt , 4/IR ΔBVEC . c , d , i , One-way ANOVA, Tukey post hoc test. Data are represented as the mean ± s.e.m. b , f , h , k , Scale bar, 100 µm. KO, knockout; p.o., per oral; ROI, region of interest.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a , Knockout strategy to inactivate IR specifically in tanycytes. Animals 10–12 weeks old received i.c.v. injection of either control virus AAV-Dio2-GFP or AAV-Dio2-mKate2 (IR GFP-Tan , IR mKate2 ) or Cre-recombinase-carrying virus AAV-Dio2-iCRE-GFP or AAV-Dio2-Cre (IR ΔTan ). b , Representative images of pAKT signal in basal and lateral tanycytes of unstimulated (0 min) and 5 and 10 min post i.v. injection of 0.5 IU kg −1 insulin in NCD-fed control animals IR GFP-Tan (NCD) (top panel), tanycyte-specific IR KO animals (IR ΔTan ) (NCD) (middle panel) and HFD-fed control animals IR GFP-Tan (HFD) (lower panel). pAKT was quantified in DAPI-positive tanycyte layer. White and yellow dashed lines indicate quantified ROI in basal and lateral tanycytes, respectively. c , d , Mean intensity of pAKT signal in DAPI-positive nuclei of basal ( c ) and lateral tanycytes ( d ). c , 5 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.047, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0041; 10 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0144, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0205. d , P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0994, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0151; 10 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0031, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0309. b – d , n (0 min) = 3/IR GFP-Tan (NCD), 4/IR ΔTan (NCD), 4/IR GFP-Tan (HFD); n (5 min) = 5 mice per group; n (10 min) = 5/IR GFP-Tan (NCD), 6/IR ΔTan (NCD), 4/IR GFP-Tan (HFD). e , Knockout strategy to inactivate IR in endothelial cells. The 10–12-week-old IR fl/fl Slco1c1-CreERT2 wt/wt and IR fl/fl Slco1c1-CreERT2 tg/wt littermates received tamoxifen (10 mg d −1 , 5 d). f , Representative images of pAKT signal in lectin-positive brain cortices of unstimulated mice (0 min) and 5 min post i.v. injection of 0.5 IU kg −1 insulin in IR wt/wt and IR ΔBVEC mice. g , pAKT in lectin-positive microvessels, normalized to IR wt/wt control animals. P (5 min) = 0.0007. f , g , n (0 min) = 3/IR wt/wt , 4/IR ΔBVEC ; n (5 min) = 4/IR wt/wt , 6/IR ΔBVEC (unpaired, two-sided Student’s t -test). h , Representative images of pAKT in the ARC of unstimulated mice (0 min) and 5, 10, 20 and 30 min post i.v. injection of 0.5 IU kg −1 insulin in NCD-fed control animals IR GFP-Tan (NCD) (top panel), tanycyte-specific IR KO animals IR ΔTan (NCD) (middle panel) and HFD-fed control animals IR GFP-Tan (HFD) (lower panel). i , Quantification of pAKT-positive cells per ARC hemisphere. 5 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.104, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0341; 10 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.0014, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0069; 20 min: P (IR GFP-Tan (NCD) versus IR ΔTan (NCD)) = 0.007, P (IR GFP-Tan (NCD) versus IR GFP-Tan (HFD)) = 0.0023. h , i , n (0 min) = 3/IR GFP-Tan (NCD), 4/IR ΔTan (NCD), 4/IR GFP-Tan (HFD); n (5 min) = 5 mice per group; n (10 min, 20 min, 30 min) = 5/IR GFP-Tan (NCD), 6/IR ΔTan (NCD), 4/IR GFP-Tan (HFD). j , Representative images of pAKT in ARC of unstimulated mice (0 min) and 5 and 15 min post i.v. injection of 0.5 IU kg −1 insulin in tamoxifen-treated IR wt/wt and IR ΔBVEC mice. k , Quantification of pAKT-positive cells per hemisphere of ARC in treated IR wt/wt and IR ΔBVEC mice. j , k , n (0 min) = 4/IR wt/wt , 3/IR ΔBVEC ; n (5 min) = 3/IR wt/wt , 5/IR ΔBVEC ; n (5 min) = 3/IR wt/wt , 4/IR ΔBVEC . c , d , i , One-way ANOVA, Tukey post hoc test. Data are represented as the mean ± s.e.m. b , f , h , k , Scale bar, 100 µm. KO, knockout; p.o., per oral; ROI, region of interest.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Knock-Out, Injection, Control, Virus

    a, b. Representative images and quantification of spontaneous fluorescence of fluorescently labelled 488-insulin (250 nmol/kg) 15 min post i.p. injection in IR mKate2 and IR ΔTan animals, p = 0.0187. c. Representative images of pAKT immunostaining 15 min post injection of 488-insulin (250 nmol/kg) in IR mKate2 and IR ΔTan animal. d-f. Immunostaining of pAKT revealed reduced insulin signalling in basal, lateral tanycytes and in ARC, quantified as mean intensity and positive cells per ARC hemisphere, respectively p(basal) = 0.0237, p(lateral) = 0.0145, p(ARC) = 0.0002. a-f. n = 7/IR mKate2 ; n = 5/IR ΔTan , unpaired, two-tailed Student’s t -test. Data are represented as the mean ± SEM. Scale bar: 100 µm.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a, b. Representative images and quantification of spontaneous fluorescence of fluorescently labelled 488-insulin (250 nmol/kg) 15 min post i.p. injection in IR mKate2 and IR ΔTan animals, p = 0.0187. c. Representative images of pAKT immunostaining 15 min post injection of 488-insulin (250 nmol/kg) in IR mKate2 and IR ΔTan animal. d-f. Immunostaining of pAKT revealed reduced insulin signalling in basal, lateral tanycytes and in ARC, quantified as mean intensity and positive cells per ARC hemisphere, respectively p(basal) = 0.0237, p(lateral) = 0.0145, p(ARC) = 0.0002. a-f. n = 7/IR mKate2 ; n = 5/IR ΔTan , unpaired, two-tailed Student’s t -test. Data are represented as the mean ± SEM. Scale bar: 100 µm.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Fluorescence, Injection, Immunostaining, Two Tailed Test

    a , Representative images of immunostaining for fluorescently labelled insulin (anti-Alexa-Fluor-488) 15 min post i.v. injection of 488-insulin (250 nmol kg −1 ) in IR fl/fl mice, which received either AAV-Dio2-mKate2 (IR mKate2 ) control or Cre-recombinase-expressing AAV-Dio2-Cre virus (IR ΔTan ). 488-insulin was quantified in DAPI-positive tanycyte layer. White and yellow dashed lines indicate quantified ROI in basal and lateral tanycytes, respectively. b – d , Mean intensity signal of Alexa-Fluor-488 fluorescent insulin in basal, P = 0.013, ( b ) and lateral ( c ) tanycytes and ARC, P = 0.0251, ( d ) of IR mKate2 and IR ΔTan mice. e , Quantification of Alexa-Fluor-488-positive cells per hemisphere of ARC of IR mKate2 and IR ΔTan mice, P = 0.0502. b , d , e , Unpaired, two-sided Student’s t -test. a – e , n = 7/IR mKate2 , 5/IR ΔTan . Data are represented as the mean ± s.e.m. Scale bar, 100 µm.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a , Representative images of immunostaining for fluorescently labelled insulin (anti-Alexa-Fluor-488) 15 min post i.v. injection of 488-insulin (250 nmol kg −1 ) in IR fl/fl mice, which received either AAV-Dio2-mKate2 (IR mKate2 ) control or Cre-recombinase-expressing AAV-Dio2-Cre virus (IR ΔTan ). 488-insulin was quantified in DAPI-positive tanycyte layer. White and yellow dashed lines indicate quantified ROI in basal and lateral tanycytes, respectively. b – d , Mean intensity signal of Alexa-Fluor-488 fluorescent insulin in basal, P = 0.013, ( b ) and lateral ( c ) tanycytes and ARC, P = 0.0251, ( d ) of IR mKate2 and IR ΔTan mice. e , Quantification of Alexa-Fluor-488-positive cells per hemisphere of ARC of IR mKate2 and IR ΔTan mice, P = 0.0502. b , d , e , Unpaired, two-sided Student’s t -test. a – e , n = 7/IR mKate2 , 5/IR ΔTan . Data are represented as the mean ± s.e.m. Scale bar, 100 µm.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Immunostaining, Injection, Control, Expressing, Virus

    a , b , Parametric maps of P values from paired t -test of differences in cumulative glucose metabolism over the recorded time determined by [18 F]FDG PET between insulin-stimulated (16-h fasted, i.p. 0.325 IU kg −1 insulin) and NaCl (0.9%)-injected, anaesthetized IR mKate2 and IR ΔTan mice ( n = 8/IR mKate2 ; n = 10/IR ΔTan ). Brain regions that had significantly reduced cumulative glucose metabolism in IR mKate2 were not altered in IR ΔTan mice ( a ), and brain regions that had significantly reduced signal in IR Δtan remained unaltered in IR mKate2 ( b ). Blue colour scale indicates regions where metabolism at NaCl > insulin (inhibition on insulin injection). Sagittal reference image inserts show location of corresponding coronal plates . C e / C p is the ratio of tissue and blood glucose concentrations, a blood glucose level-insensitive measure for glucose metabolism. CP, caudate putamen; BNST/LPO, bed nucleus of stria terminalis/lateral preoptic area; PAG, periaqueductal grey; RN, reticular nucleus; ZI/aSNR, zona incerta/anterior substantia nigra; pSNR, posterior substantia nigra; MV, medial vestibular nucleus; SPV, spinal vestibular nucleus. Paired, two-sided Student’s t -test. a , For IR mKate2 P (CP) = 0.0007, P (BNST/LPO) = 0.0056, P (LPO) = 0.0003, P (VMH/LH) = 0.0109, P (PAG) = 0.0015, P (RN) = 0.0097, b , For IR ΔTan P (ZI/aSNR) = 0.003, P (pSNR) = 0.0023, P (MV) = 0.0006, P (SPV) = 0.0105. Data are represented as the mean ± s.e.m. * - P <0.05, ** - P <0.01, *** - P <0.001.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a , b , Parametric maps of P values from paired t -test of differences in cumulative glucose metabolism over the recorded time determined by [18 F]FDG PET between insulin-stimulated (16-h fasted, i.p. 0.325 IU kg −1 insulin) and NaCl (0.9%)-injected, anaesthetized IR mKate2 and IR ΔTan mice ( n = 8/IR mKate2 ; n = 10/IR ΔTan ). Brain regions that had significantly reduced cumulative glucose metabolism in IR mKate2 were not altered in IR ΔTan mice ( a ), and brain regions that had significantly reduced signal in IR Δtan remained unaltered in IR mKate2 ( b ). Blue colour scale indicates regions where metabolism at NaCl > insulin (inhibition on insulin injection). Sagittal reference image inserts show location of corresponding coronal plates . C e / C p is the ratio of tissue and blood glucose concentrations, a blood glucose level-insensitive measure for glucose metabolism. CP, caudate putamen; BNST/LPO, bed nucleus of stria terminalis/lateral preoptic area; PAG, periaqueductal grey; RN, reticular nucleus; ZI/aSNR, zona incerta/anterior substantia nigra; pSNR, posterior substantia nigra; MV, medial vestibular nucleus; SPV, spinal vestibular nucleus. Paired, two-sided Student’s t -test. a , For IR mKate2 P (CP) = 0.0007, P (BNST/LPO) = 0.0056, P (LPO) = 0.0003, P (VMH/LH) = 0.0109, P (PAG) = 0.0015, P (RN) = 0.0097, b , For IR ΔTan P (ZI/aSNR) = 0.003, P (pSNR) = 0.0023, P (MV) = 0.0006, P (SPV) = 0.0105. Data are represented as the mean ± s.e.m. * - P <0.05, ** - P <0.01, *** - P <0.001.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Injection, Inhibition

    a , Food intake in random-fed IR mKate2 control animals after NaCl (0.9%) or ghrelin injection (i.p., 1 mg kg −1 ) over the 4-h measurement time. Two-way ANOVA P = 0.0002, P (1 h) = 0.013, P (2 h) = 0.0009, P (4 h) < 0.0001 (two-way ANOVA, Šídák post hoc test). b , Food intake 4 h post treatment with NaCl (0.9%) or ghrelin (i.p., 1 mg kg −1 ) in IR mKate2 control animals, P = 0.0001 (paired, two-tailed Student’s t -test). a , b , n = 12/IR mKate2 . c , Mean food intake in random-fed IR ΔTan animals after saline or ghrelin injection (i.p., 1 mg kg −1 ) over the 4-h measurement time. d , Food intake 4 h post treatment with NaCl or ghrelin injection (i.p., 1 mg kg −1 ) in IR ΔTan animals. c , d , n = 13/IR ΔTan . a – d , Data are represented as the mean ± s.e.m. * - P <0.05, ** - P <0.01, *** - P <0.001, **** - P <0.0001.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a , Food intake in random-fed IR mKate2 control animals after NaCl (0.9%) or ghrelin injection (i.p., 1 mg kg −1 ) over the 4-h measurement time. Two-way ANOVA P = 0.0002, P (1 h) = 0.013, P (2 h) = 0.0009, P (4 h) < 0.0001 (two-way ANOVA, Šídák post hoc test). b , Food intake 4 h post treatment with NaCl (0.9%) or ghrelin (i.p., 1 mg kg −1 ) in IR mKate2 control animals, P = 0.0001 (paired, two-tailed Student’s t -test). a , b , n = 12/IR mKate2 . c , Mean food intake in random-fed IR ΔTan animals after saline or ghrelin injection (i.p., 1 mg kg −1 ) over the 4-h measurement time. d , Food intake 4 h post treatment with NaCl or ghrelin injection (i.p., 1 mg kg −1 ) in IR ΔTan animals. c , d , n = 13/IR ΔTan . a – d , Data are represented as the mean ± s.e.m. * - P <0.05, ** - P <0.01, *** - P <0.001, **** - P <0.0001.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Control, Injection, Two Tailed Test, Saline

    a , Tanycyte- and AgRP neuron-specific rAAVs, which were employed to record AgRP neuron dynamics. NLS, nuclear localization signal; *Kozak sequence. b , Targeting strategy of tanycytes and AgRP to record AgRP neuron dynamics in mice with inactivated IR in tanycytes. At age 10 weeks IR fl/fl Agrp-2a-Dre tg/wt were injected with rAAV into the lateral ventricle expressing either Cre-recombinase (AAV-Dio2-CRE) or mKate2 fluorescent protein (AAV-Dio2-mKate2), and in the ARC unilaterally with an AAV virus carrying Dre-dependent, neuron-specific AAV-CAG-Frex-GCAMP6 flanked by two rox sites. c , d , Calcium signal traces ( c ) and AUC ( d ) from AgRP neurons in nonfasted IR mKate2 AgRP GCaMP6 and IR ∆Tan AgRP GCaMP6 mice treated with ghrelin (60 µg per mouse, i.p.) and in 16-h-fasted IR mKate2 AgRP GCaMP6 and IR ∆Tan AgRP GCaMP6 mice exposed to food pellet, treated with CCK (10 µg kg −1 , i.p.), 5-HT (2 mg kg −1 , i.p.) or PBS control (10 µl g −1 body weight, i.p.). Blue lines in the figure indicate the time of the intervention. Data are represented as the mean ± s.e.m. n = 3–6 mice per group. P (5-HT) = 0.030 (unpaired, two-tailed Student’s t -test ( d )), * P ≤ 0.05. e , Representative images of GCaMP6 expression and pAKT signal in ARC 10 min post i.v. injection of insulin (0.5 IU kg −1 ) of IR mKate2 AgRP GCaMP6 and IR ∆Tan AgRP GCaMP6 mice at the end of the fibre photometry recordings, n = 3–6 mice per group. Scale bar, 100 µm. dF / F , represents the change in GCaMPs fluorescence from the mean level before the treatment.

    Journal: Nature Metabolism

    Article Title: Insulin signalling in tanycytes gates hypothalamic insulin uptake and regulation of AgRP neuron activity

    doi: 10.1038/s42255-021-00499-0

    Figure Lengend Snippet: a , Tanycyte- and AgRP neuron-specific rAAVs, which were employed to record AgRP neuron dynamics. NLS, nuclear localization signal; *Kozak sequence. b , Targeting strategy of tanycytes and AgRP to record AgRP neuron dynamics in mice with inactivated IR in tanycytes. At age 10 weeks IR fl/fl Agrp-2a-Dre tg/wt were injected with rAAV into the lateral ventricle expressing either Cre-recombinase (AAV-Dio2-CRE) or mKate2 fluorescent protein (AAV-Dio2-mKate2), and in the ARC unilaterally with an AAV virus carrying Dre-dependent, neuron-specific AAV-CAG-Frex-GCAMP6 flanked by two rox sites. c , d , Calcium signal traces ( c ) and AUC ( d ) from AgRP neurons in nonfasted IR mKate2 AgRP GCaMP6 and IR ∆Tan AgRP GCaMP6 mice treated with ghrelin (60 µg per mouse, i.p.) and in 16-h-fasted IR mKate2 AgRP GCaMP6 and IR ∆Tan AgRP GCaMP6 mice exposed to food pellet, treated with CCK (10 µg kg −1 , i.p.), 5-HT (2 mg kg −1 , i.p.) or PBS control (10 µl g −1 body weight, i.p.). Blue lines in the figure indicate the time of the intervention. Data are represented as the mean ± s.e.m. n = 3–6 mice per group. P (5-HT) = 0.030 (unpaired, two-tailed Student’s t -test ( d )), * P ≤ 0.05. e , Representative images of GCaMP6 expression and pAKT signal in ARC 10 min post i.v. injection of insulin (0.5 IU kg −1 ) of IR mKate2 AgRP GCaMP6 and IR ∆Tan AgRP GCaMP6 mice at the end of the fibre photometry recordings, n = 3–6 mice per group. Scale bar, 100 µm. dF / F , represents the change in GCaMPs fluorescence from the mean level before the treatment.

    Article Snippet: AAV-Dio2-mKate2 was generated to replace GFP with a far-red fluorescent protein containing a nuclear localization signal. mKate2 reporter protein sequence was amplified from pAAV-hSynapsin1-GCaMP6s-P2A-mKate2 sequence (Addgene no. 112006) using 5SpemKate2: actagtgccaccatgggtaagaagaagagaagGTGAGCGAG-CTGATTAAGGAGAAC and 3NotmKate2: gcggccgctTATCTGTGCCCCAGTTTGC-AGG primers with the High Fidelity Master PCR (no. 12140314001, Roche) kit.

    Techniques: Sequencing, Injection, Expressing, Virus, Control, Two Tailed Test, Fluorescence